STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMB96628.1InterPro IPR000888; COGs: COG1898 dTDP-4-dehydrorhamnose 3 5-epimerase; KEGG: chy:CHY_0977 dTDP-4-dehydrorhamnose 3,5-epimerase; SPTR: dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 35-epimerase related. (160 aa)    
Predicted Functional Partners:
SMB96629.1
dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
 
 
 0.999
SMB96634.1
dTDP-glucose 4,6-dehydratase; InterPro IPR005888:IPR001509; COGs: COG1088 dTDP-D-glucose 4 6-dehydratase; KEGG: hya:HY04AAS1_1572 dTDP-glucose 4,6-dehydratase; SPTR: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; TIGRFAM: dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
 
 
 0.998
SMB96625.1
Glucose-1-phosphate thymidylyltransferase; InterPro IPR005908:IPR005835; COGs: COG1209 dTDP-glucose pyrophosphorylase; KEGG: pth:PTH_1078 dTDP-glucose pyrophosphorylase; SPTR: dTDP-glucose pyrophosphorylase; PFAM: Nucleotidyl transferase; TIGRFAM: glucose-1-phosphate thymidyltransferase.
 
 
 0.996
SMB99292.1
Nucleotidyltransferase; InterProIPR018357:IPR005835:IPR001451:IPR005844:IPR 005845; COGs: COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon); KEGG: mta:Moth_1925 nucleotidyl transferase; SPTR: Nucleotidyl transferase; PFAM: Nucleotidyl transferase; transferase hexapeptide repeat containing protein; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II.
  
 0.989
SMB93924.1
Tetratricopeptide repeat-containing protein; InterProIPR001296:IPR001440:IPR013216:IPR019734:IPR 013026; COGs: COG0438 Glycosyltransferase; KEGG: pcu:pc1183 putative mannosyltransferase; SPTR: Putative uncharacterized protein; SMART: Tetratricopeptide repeat; PFAM: glycosyl transferase group 1; Tetratricopeptide TPR_1 repeat-containing protein; Methyltransferase type 11.
  
  
 0.936
SMB98203.1
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; InterPro IPR017475:IPR003362; COGs: COG2148 Sugar transferase involved in lipopolysaccharide synthesis; KEGG: adg:Adeg_0517 exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; SPTR: Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
 
 
 0.935
SMB98676.1
UDP-glucose 4-epimerase; InterPro IPR001509; COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; KEGG: mta:Moth_1589 NAD-dependent epimerase/dehydratase; SPTR: NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase.
  
 
 0.902
SMB96660.1
Glycosyltransferase, GT2 family; InterPro IPR001173; COGs: COG1216 glycosyltransferase; KEGG: adg:Adeg_1129 glycosyl transferase family 2; SPTR: Glycosyl transferase family 2; PFAM: glycosyl transferase family 2.
 
  
 0.738
SMB96614.1
Glycosyl transferase family 2; InterPro IPR013026:IPR001173:IPR001440:IPR019734; COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; KEGG: adg:Adeg_0252 glycosyl transferase family 2; SPTR: Glycosyl transferase family 2; PFAM: glycosyl transferase family 2; Tetratricopeptide TPR_1 repeat-containing protein.
  
  
 0.733
SMB96623.1
Flagellar protein FliS; InterPro IPR003713; COGs: COG1516 Flagellin-specific chaperone FliS; KEGG: hor:Hore_17030 flagellar protein FliS; SPTR: Flagellar protein FliS; TIGRFAM: flagellar protein FliS.
       0.688
Your Current Organism:
Thermanaeromonas toyohensis
NCBI taxonomy Id: 698762
Other names: T. toyohensis ToBE, Thermanaeromonas toyohensis DSM 14490, Thermanaeromonas toyohensis ToBE, Thermanaeromonas toyohensis str. ToBE, Thermanaeromonas toyohensis strain ToBE, Thermoanaerobacter sp. ToBE
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