STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMB97997.1KEGG: ctc:CTC02116 phage-like element pbsx protein XkdS. (73 aa)    
Predicted Functional Partners:
SMB97998.1
Phosphoribosyl 1,2-cyclic phosphodiesterase; COGs: COG1235 Metal-dependent hydrolase of the beta-lactamase superfamily I; KEGG: amt:Amet_2603 hypothetical protein; SPTR: Gp51.
       0.486
SMB97999.1
Recombination protein RecT; InterPro IPR018330; COGs: COG3723 Recombinational DNA repair protein (RecE pathway); KEGG: saj:SaurJH9_2041 RecT protein; SPTR: Putative uncharacterized protein; PFAM: DNA single-strand annealing protein RecT-like.
       0.486
SMB98000.1
SMC domain protein; InterPro IPR003395; COGs: COG1196 Chromosome segregation ATPase; KEGG: gfo:GFO_2487 hypothetical protein; SPTR: Gp49; PFAM: SMC domain protein.
       0.486
SMB98001.1
Hypothetical protein; KEGG: sar:SAR1841 putative surface anchored protein; SPTR: Sulfate adenylyltransferase, large subunit.
       0.486
SMB97996.1
Hypothetical protein; KEGG: chy:CHY_1687 putative prophage LambdaCh01, replication protein O; SPTR: Putative prophage LambdaCh01, replication protein O.
       0.402
Your Current Organism:
Thermanaeromonas toyohensis
NCBI taxonomy Id: 698762
Other names: T. toyohensis ToBE, Thermanaeromonas toyohensis DSM 14490, Thermanaeromonas toyohensis ToBE, Thermanaeromonas toyohensis str. ToBE, Thermanaeromonas toyohensis strain ToBE, Thermoanaerobacter sp. ToBE
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