STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMB97998.1Phosphoribosyl 1,2-cyclic phosphodiesterase; COGs: COG1235 Metal-dependent hydrolase of the beta-lactamase superfamily I; KEGG: amt:Amet_2603 hypothetical protein; SPTR: Gp51. (238 aa)    
Predicted Functional Partners:
SMB98000.1
SMC domain protein; InterPro IPR003395; COGs: COG1196 Chromosome segregation ATPase; KEGG: gfo:GFO_2487 hypothetical protein; SPTR: Gp49; PFAM: SMC domain protein.
 
    0.959
SMB97999.1
Recombination protein RecT; InterPro IPR018330; COGs: COG3723 Recombinational DNA repair protein (RecE pathway); KEGG: saj:SaurJH9_2041 RecT protein; SPTR: Putative uncharacterized protein; PFAM: DNA single-strand annealing protein RecT-like.
 
     0.938
SMB98001.1
Hypothetical protein; KEGG: sar:SAR1841 putative surface anchored protein; SPTR: Sulfate adenylyltransferase, large subunit.
       0.773
lipA
Lipoic acid synthetase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.
    
 0.578
SMB97997.1
KEGG: ctc:CTC02116 phage-like element pbsx protein XkdS.
       0.486
SMB98002.1
Hypothetical protein; KEGG: ago:AGOS_AEL118C AEL118Cp; SPTR: Probable serine/threonine-protein kinase HAL5-like.
       0.464
SMB98004.1
KEGG: aac:Aaci_1200 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.464
SMB88499.1
Two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR; InterProIPR000014:IPR005467:IPR000700:IPR003660:IPR 004358:IPR003661:IPR003594:IPR013767; COGs: COG5002 Signal transduction histidine kinase; KEGG: mta:Moth_2494 multi-sensor signal transduction histidine kinase; SPTR: Sensor protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; PAS domain containing protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; histid [...]
  
  
 0.451
SMB94251.1
Two-component system, OmpR family, sensor histidine kinase ResE; InterProIPR003660:IPR013767:IPR003661:IPR003594:IPR 005467:IPR000014:IPR004358; COGs: COG5002 Signal transduction histidine kinase; KEGG: mta:Moth_0828 multi-sensor signal transduction histidine kinase; SPTR: Sensor protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; PAS domain containing protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; PAS fold domai [...]
  
  
 0.451
rlmH
23S rRNA (pseudouridine1915-N3)-methyltransferase; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family.
 
     0.437
Your Current Organism:
Thermanaeromonas toyohensis
NCBI taxonomy Id: 698762
Other names: T. toyohensis ToBE, Thermanaeromonas toyohensis DSM 14490, Thermanaeromonas toyohensis ToBE, Thermanaeromonas toyohensis str. ToBE, Thermanaeromonas toyohensis strain ToBE, Thermoanaerobacter sp. ToBE
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.