STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMB98447.1Protein of unknown function; KEGG: mta:Moth_1359 hypothetical protein; SPTR: Putative uncharacterized protein. (212 aa)    
Predicted Functional Partners:
SMB98446.1
Sporulation protein YtfJ; InterPro IPR014229; COGs: COG3874 conserved hypothetical protein; KEGG: mta:Moth_1358 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Sporulation protein YtfJ; TIGRFAM: sporulation protein YtfJ.
  
    0.929
scpB
Condensin subunit ScpB; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.
       0.807
SMB98449.1
Condensin subunit ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.
       0.807
SMB98450.1
tryptophanyl-tRNA synthetase; InterPro IPR002306:IPR002305:IPR001412; COGs: COG0180 Tryptophanyl-tRNA synthetase; KEGG: tryptophanyl-tRNA synthetase; SPTR: Tryptophanyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib; PRIAM: Tryptophan--tRNA ligase; TIGRFAM: tryptophanyl-tRNA synthetase.
       0.774
SMB98445.1
D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6); InterPro IPR001967:IPR012907:IPR018044; COGs: COG1686 D-alanyl-D-alanine carboxypeptidase; KEGG: mta:Moth_1357 serine-type D-Ala-D-Ala carboxypeptidase; SPTR: Serine-type D-Ala-D-Ala carboxypeptidase; PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; PRIAM: Serine-type D-Ala-D-Ala carboxypeptidase; Belongs to the peptidase S11 family.
  
    0.646
SMB98451.1
InterPro IPR008915; COGs: COG1994 Zn-dependent protease; KEGG: mta:Moth_1362 peptidase M50; SPTR: Peptidase M50; PFAM: peptidase M50.
       0.610
SMB98444.1
Spore maturation protein A; InterPro IPR011642; COGs: COG2715 Uncharacterized membrane protein required for spore maturation in B.subtilis; KEGG: mta:Moth_1356 nucleoside recognition; SPTR: Nucleoside recognition; PFAM: nucleoside recognition domain protein.
       0.554
SMB94636.1
Accessory gene regulator B; InterPro IPR006741; KEGG: mta:Moth_0905 accessory gene regulator B; SPTR: Accessory gene regulator B; SMART: Accessory gene regulator B; PFAM: Accessory gene regulator B; manually curated.
  
     0.528
SMB98443.1
InterPro IPR011642; COGs: COG0700 membrane protein; KEGG: mta:Moth_1355 nucleoside recognition; SPTR: Nucleoside recognition; PFAM: nucleoside recognition domain protein.
       0.506
SMB89457.1
Uncharacterized protein YrrD, contains PRC-barrel domain; InterPro IPR007903; COGs: COG3881 conserved hypothetical protein; KEGG: mta:Moth_0077 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: PRC-barrel domain protein.
  
     0.480
Your Current Organism:
Thermanaeromonas toyohensis
NCBI taxonomy Id: 698762
Other names: T. toyohensis ToBE, Thermanaeromonas toyohensis DSM 14490, Thermanaeromonas toyohensis ToBE, Thermanaeromonas toyohensis str. ToBE, Thermanaeromonas toyohensis strain ToBE, Thermoanaerobacter sp. ToBE
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.