STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMB98531.1KEGG: chy:CHY_2613 hypothetical protein; SPTR: Putative uncharacterized protein. (256 aa)    
Predicted Functional Partners:
SMB99268.1
Hypothetical protein; InterPro IPR003675; KEGG: mta:Moth_1913 abortive infection protein; SPTR: Abortive infection protein; PFAM: Abortive infection protein.
    
   0.785
SMB92575.1
N-acetylmuramoyl-L-alanine amidase; InterPro IPR003646:IPR002508:IPR012854:IPR013247; COGs: COG0860 N-acetylmuramoyl-L-alanine amidase; KEGG: mta:Moth_0517 N-acetylmuramoyl-L-alanine amidase; SPTR: N-acetylmuramoyl-L-alanine amidase; SMART: cell wall hydrolase/autolysin; SH3 domain protein; PFAM: cell wall hydrolase/autolysin; copper amine oxidase-like domain-containing protein; SH3 type 3 domain protein; PRIAM: N-acetylmuramoyl-L-alanine amidase.
  
 
 0.684
SMB98530.1
InterPro IPR001173:IPR001440:IPR019734:IPR013026; COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; KEGG: drm:Dred_1386 glycosyl transferase family protein; SPTR: Glycosyl transferase, family 2; PFAM: glycosyl transferase family 2; Tetratricopeptide TPR_1 repeat-containing protein.
       0.559
SMB98529.1
InterPro IPR001173:IPR001440:IPR019734:IPR013026; COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; KEGG: drm:Dred_1401 glycosyl transferase family protein; SPTR: Glycosyl transferase, family 2; PFAM: glycosyl transferase family 2; Tetratricopeptide TPR_1 repeat-containing protein.
       0.558
SMB89335.1
Protein of unknown function; InterPro IPR011098:IPR007137:IPR010611; COGs: COG3583 conserved hypothetical protein; KEGG: mta:Moth_0050 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: 3D domain-containing protein; G5 domain protein; protein of unknown function DUF348.
   
    0.545
SMB89341.1
Protein of unknown function; InterPro IPR011098:IPR007137:IPR010611; COGs: COG3583 conserved hypothetical protein; KEGG: mta:Moth_0051 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: G5 domain protein; protein of unknown function DUF348; 3D domain-containing protein.
   
    0.545
SMB96199.1
InterPro IPR010611; COGs: COG3584 conserved hypothetical protein; KEGG: 3D domain protein; SPTR: 3D domain protein; PFAM: 3D domain-containing protein.
   
    0.545
SMB98535.1
RNA polymerase, sigma subunit, RpoX/SigF; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
       0.495
SMB97936.1
LysM domain-containing protein; InterPro IPR018392:IPR002482; KEGG: dae:Dtox_4246 peptidoglycan-binding LysM; SPTR: Peptidoglycan-binding LysM; SMART: Peptidoglycan-binding LysM; PFAM: Peptidoglycan-binding lysin domain; manually curated.
   
  
 0.490
SMB98528.1
Methyltransferase domain-containing protein; InterPro IPR013216; KEGG: adg:Adeg_1129 glycosyl transferase family 2; SPTR: Glycosyl transferase family 2; PFAM: Methyltransferase type 11.
       0.481
Your Current Organism:
Thermanaeromonas toyohensis
NCBI taxonomy Id: 698762
Other names: T. toyohensis ToBE, Thermanaeromonas toyohensis DSM 14490, Thermanaeromonas toyohensis ToBE, Thermanaeromonas toyohensis str. ToBE, Thermanaeromonas toyohensis strain ToBE, Thermoanaerobacter sp. ToBE
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