STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMB98821.1KEGG: hmo:HM1_1868 hypothetical protein; SPTR: Putative uncharacterized protein. (54 aa)    
Predicted Functional Partners:
SMB98822.1
Uncharacterized protein YrrD, contains PRC-barrel domain; InterPro IPR007903; COGs: COG3881 conserved hypothetical protein; KEGG: mta:Moth_1649 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: PRC-barrel domain protein.
  
    0.840
SMB98820.1
Hypothetical protein; KEGG: sub:SUB1458 sugar phosphotransferase system (PTS), galactitol-specific family, IIC component; SPTR: Sugar phosphotransferase system (PTS), galactitol-specific family, IIC component.
       0.773
SMB99906.1
KEGG: mta:Moth_2110 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.746
SMB98818.1
InterPro IPR002549; COGs: COG0628 permease; KEGG: mta:Moth_1647 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: protein of unknown function UPF0118.
       0.745
mnmA
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.
       0.723
SMC00098.1
InterPro IPR004518; KEGG: mta:Moth_2388 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: MazG nucleotide pyrophosphohydrolase.
  
     0.659
SMB97199.1
KEGG: mta:Moth_1082 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.596
SMB98827.1
Nitrogen fixation protein NifU; InterPro IPR017787:IPR002871; COGs: COG0822 NifU homolog involved in Fe-S cluster formation; KEGG: mta:Moth_1651 nitrogen-fixing NifU-like; SPTR: Nitrogen-fixing NifU-like; PFAM: nitrogen-fixing NifU domain protein; TIGRFAM: FeS cluster assembly scaffold protein NifU.
       0.569
iscS
Cysteine desulfurase; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. NifS/IscS subfamily.
       0.569
SMB98816.1
Hypothetical protein.
       0.531
Your Current Organism:
Thermanaeromonas toyohensis
NCBI taxonomy Id: 698762
Other names: T. toyohensis ToBE, Thermanaeromonas toyohensis DSM 14490, Thermanaeromonas toyohensis ToBE, Thermanaeromonas toyohensis str. ToBE, Thermanaeromonas toyohensis strain ToBE, Thermoanaerobacter sp. ToBE
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