STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
deoB-2Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family. (388 aa)    
Predicted Functional Partners:
deoC
Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.
 
 0.991
SMB98744.1
Pyrimidine-nucleoside phosphorylase; InterProIPR017872:IPR018090:IPR000053:IPR017459:IPR 000312:IPR013102; COGs: COG0213 Thymidine phosphorylase; KEGG: pyrimidine-nucleoside phosphorylase; SPTR: Pyrimidine-nucleoside phosphorylase; PFAM: glycosyl transferase family 3; Glycosyl transferase, family 3-like; Pyrimidine nucleoside phosphorylase domain; TIGRFAM: pyrimidine-nucleoside phosphorylase.
 
 
 0.979
SMB99436.1
Methylthioadenosine phosphorylase; Purine nucleoside phosphorylase which is highly specific for 6-oxopurine nucleosides. Cleaves guanosine or inosine to respective bases and sugar-1-phosphate molecules. Involved in purine salvage.
  
  
 0.890
SMB92996.1
Cytidine deaminase; InterPro IPR002125:IPR016192; COGs: COG0295 Cytidine deaminase; KEGG: mta:Moth_0599 cytidine deaminase; SPTR: Cytidine deaminase; PFAM: CMP/dCMP deaminase zinc-binding; manually curated.
     0.833
SMB98546.1
ADP-ribose pyrophosphatase; InterPro IPR000086:IPR020084; KEGG: mta:Moth_1504 NUDIX hydrolase; SPTR: NUDIX hydrolase; PFAM: NUDIX hydrolase.
    
  0.741
SMB99149.1
Pyruvate kinase; InterPro IPR001697:IPR015793:IPR015794; COGs: COG0469 Pyruvate kinase; KEGG: mta:Moth_1867 pyruvate kinase; SPTR: Pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta; PRIAM: Pyruvate kinase; TIGRFAM: pyruvate kinase; Belongs to the pyruvate kinase family.
  
    0.736
prs
Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.
     
 0.728
SMB91406.1
Phosphoglucomutase, alpha-D-glucose phosphate-specific; InterProIPR005844:IPR005845:IPR005846:IPR005843:IPR 005841; COGs: COG1109 Phosphomannomutase; KEGG: mta:Moth_0221 phosphoglucomutase; SPTR: Phosphoglucomutase; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase.
     
 0.728
SMB91467.1
Transketolase subunit A; InterPro IPR005474; COGs: COG3959 Transketolase N-terminal subunit; KEGG: mta:Moth_0236 transketolase subunit A; SPTR: Transketolase subunit A; PFAM: Transketolase domain-containing protein.
    
 0.714
rbsK
Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
   
 
 0.705
Your Current Organism:
Thermanaeromonas toyohensis
NCBI taxonomy Id: 698762
Other names: T. toyohensis ToBE, Thermanaeromonas toyohensis DSM 14490, Thermanaeromonas toyohensis ToBE, Thermanaeromonas toyohensis str. ToBE, Thermanaeromonas toyohensis strain ToBE, Thermoanaerobacter sp. ToBE
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