STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMB99514.1InterPro IPR000537; COGs: COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferase; KEGG: mta:Moth_1995 phosphoribose diphosphate:decaprenyl-phosphate phosphoribosyltransferase; SPTR: UbiA prenyltransferase; PFAM: UbiA prenyltransferase; Belongs to the UbiA prenyltransferase family. (302 aa)    
Predicted Functional Partners:
SMB91208.1
Protoporphyrin IX magnesium-chelatase; InterPro IPR003593:IPR002035:IPR000523:IPR012804; COGs: COG1239 Mg-chelatase subunit ChlI; KEGG: dau:Daud_1209 magnesium chelatase; SPTR: Magnesium chelatase; SMART: von Willebrand factor type A; AAA ATPase; PFAM: magnesium chelatase ChlI subunit; von Willebrand factor type A; TIGRFAM: cobaltochelatase subunit.
  
  
 0.742
SMB99512.1
KEGG: mta:Moth_1929 hypothetical protein; SPTR: Putative uncharacterized protein.
 
  
 0.707
atpD
ATP synthase F1 subcomplex beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
   
 0.663
lgt
Phosphatidylglycerol:prolipoprotein diacylglycerol transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.
  
    0.654
SMB94916.1
Rubredoxin/NADH-FMN oxidoreductase RutF, flavin reductase (DIM6/NTAB) family; InterPro IPR002563:IPR004039:IPR018527:IPR001052; COGs: COG1853 Conserved protein/domain typically associated with flavoprotein oxygenase DIM6/NTAB family; KEGG: mta:Moth_1288 flavin reductase-like, FMN-binding; SPTR: High molecular weight rubredoxin; PFAM: flavin reductase domain protein FMN-binding; Rubredoxin-type Fe(Cys)4 protein.
     
 0.607
SMB94708.1
Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
     
 0.606
ubiX
4-hydroxy-3-polyprenylbenzoate decarboxylase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family.
    
 0.560
ribBA
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
     
 0.551
SMB99732.1
Fe-S oxidoreductase/FAD/FMN-containing dehydrogenase; InterPro IPR006094:IPR004113:IPR004017:IPR016166; COGs: COG0247 Fe-S oxidoreductase; KEGG: FAD linked oxidase domain protein; SPTR: Cysteine-rich domain protein/FAD binding domain protein; PFAM: FAD linked oxidase domain protein; protein of unknown function DUF224 cysteine-rich region domain protein.
    
 0.540
SMC00073.1
Fe-S oxidoreductase; InterProIPR006094:IPR004113:IPR004017:IPR017896:IPR 016166; COGs: COG0247 Fe-S oxidoreductase; KEGG: FAD linked oxidase domain protein; SPTR: Heterodisulfide reductase, iron-sulfur subunit domain protein; PFAM: FAD linked oxidase domain protein; protein of unknown function DUF224 cysteine-rich region domain protein.
    
 0.540
Your Current Organism:
Thermanaeromonas toyohensis
NCBI taxonomy Id: 698762
Other names: T. toyohensis ToBE, Thermanaeromonas toyohensis DSM 14490, Thermanaeromonas toyohensis ToBE, Thermanaeromonas toyohensis str. ToBE, Thermanaeromonas toyohensis strain ToBE, Thermoanaerobacter sp. ToBE
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