STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMB99576.1Transposase, Mutator family; Required for the transposition of the insertion element. (119 aa)    
Predicted Functional Partners:
SMB99575.1
InterPro IPR000524:IPR011663; COGs: COG2188 Transcriptional regulators; KEGG: ttr:Tter_2142 transcriptional regulator, GntR family; SPTR: Transcriptional regulator, GntR family; SMART: regulatory protein GntR HTH; PFAM: UbiC transcription regulator-associated domain-containing protein; regulatory protein GntR HTH.
       0.488
SMB92881.1
Competence protein ComEA; InterPro IPR003583:IPR019554:IPR000445:IPR004509; COGs: COG1555 DNA uptake protein and related DNA-binding protein; KEGG: mta:Moth_0570 competence protein ComEA helix-hairpin-helix region; SPTR: Competence protein ComEA helix-hairpin-helix region; SMART: Helix-hairpin-helix DNA-binding class 1; PFAM: Soluble ligand binding domain; helix-hairpin-helix motif; TIGRFAM: competence protein ComEA helix-hairpin-helix repeat protein.
   
    0.482
SMB97798.1
DNA replication protein DnaC; InterPro IPR002611:IPR003593; COGs: COG1484 DNA replication protein; KEGG: sth:STH274 IS21 family transposase; SPTR: IS21 family transposase; SMART: AAA ATPase; PFAM: IstB domain protein ATP-binding protein.
  
    0.430
SMB97879.1
KEGG: mta:Moth_0522 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.410
Your Current Organism:
Thermanaeromonas toyohensis
NCBI taxonomy Id: 698762
Other names: T. toyohensis ToBE, Thermanaeromonas toyohensis DSM 14490, Thermanaeromonas toyohensis ToBE, Thermanaeromonas toyohensis str. ToBE, Thermanaeromonas toyohensis strain ToBE, Thermoanaerobacter sp. ToBE
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