STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMB99797.1InterPro IPR012861; COGs: COG4272 membrane protein; KEGG: cce:Ccel_1650 protein of unknown function DUF1634; SPTR: Putative uncharacterized protein; PFAM: protein of unknown function DUF1634. (129 aa)    
Predicted Functional Partners:
SMB99796.1
Hypothetical protein; InterPro IPR002781; COGs: COG0730 permease; KEGG: tte:TTE0100 permease; SPTR: Predicted permease; PFAM: protein of unknown function DUF81.
 
  
 0.965
SMB99795.1
Transcriptional regulator, GntR family; InterPro IPR000524:IPR011663; COGs: COG2188 Transcriptional regulators; KEGG: ttr:Tter_2575 phophonate C-P lyase system transcriptional regulator PhnF, GntR family; SPTR: Phophonate C-P lyase system transcriptional regulator PhnF, GntR family; SMART: regulatory protein GntR HTH; PFAM: UbiC transcription regulator-associated domain-containing protein; regulatory protein GntR HTH.
       0.692
SMB91839.1
Ribonuclease BN, tRNA processing enzyme; COGs: COG1234 Metal-dependent hydrolase of the beta-lactamase superfamily III; KEGG: metal-dependent hydrolase; SPTR: Putative uncharacterized protein.
 
     0.426
Your Current Organism:
Thermanaeromonas toyohensis
NCBI taxonomy Id: 698762
Other names: T. toyohensis ToBE, Thermanaeromonas toyohensis DSM 14490, Thermanaeromonas toyohensis ToBE, Thermanaeromonas toyohensis str. ToBE, Thermanaeromonas toyohensis strain ToBE, Thermoanaerobacter sp. ToBE
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.