STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMC00004.1Hypothetical protein; InterPro IPR008482; COGs: COG1415 conserved hypothetical protein; KEGG: mta:Moth_0136 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: protein of unknown function DUF763. (416 aa)    
Predicted Functional Partners:
SMC00005.1
BFD-like [2Fe-2S] binding domain-containing protein; InterPro IPR007419; KEGG: apr:Apre_1780 BFD domain protein (2Fe-2S)-binding domain protein; SPTR: BFD domain protein (2Fe-2S)-binding domain protein; PFAM: BFD domain protein [2Fe-2S]-binding domain protein.
       0.773
SMC00006.1
InterPro IPR011095:IPR011761; COGs: COG1181 D-alanine-D-alanine ligase and related ATP-grasp protein; KEGG: dba:Dbac_1775 D-alanine--D-alanine ligase domain protein; SPTR: D-alanine--D-alanine ligase domain protein; PFAM: D-alanine--D-alanine ligase domain protein.
       0.580
SMC00000.1
KEGG: mta:Moth_1581 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.574
SMB98706.1
Transporter family protein; InterPro IPR000620; COGs: COG2510 membrane protein; KEGG: swo:Swol_1359 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: protein of unknown function DUF6 transmembrane.
  
     0.529
SMB97069.1
InterPro IPR016431:IPR007197; COGs: COG1180 Pyruvate-formate lyase-activating enzyme; KEGG: adg:Adeg_0355 radical SAM domain protein; SPTR: Radical SAM domain protein; PFAM: Radical SAM domain protein.
  
     0.510
SMB99577.1
InterPro IPR016431:IPR007197; COGs: COG1180 Pyruvate-formate lyase-activating enzyme; KEGG: adg:Adeg_0355 radical SAM domain protein; SPTR: Radical SAM domain protein; PFAM: Radical SAM domain protein.
  
     0.491
SMC00008.1
Accessory gene regulator B; InterPro IPR006741; KEGG: mta:Moth_1580 accessory gene regulator B; SPTR: Accessory gene regulator B; SMART: Accessory gene regulator B; PFAM: Accessory gene regulator B.
 
     0.470
SMB95651.1
Radical SAM superfamily protein; InterPro IPR006638:IPR007197; COGs: COG1533 DNA repair photolyase; KEGG: pcl:Pcal_0286 radical SAM domain-containing protein; SPTR: Putative uncharacterized protein; SMART: Elongator protein 3/MiaB/NifB; PFAM: Radical SAM domain protein.
  
     0.454
SMB97670.1
DNA repair photolyase; InterPro IPR007197:IPR013032:IPR006638; COGs: COG1533 DNA repair photolyase; KEGG: dau:Daud_1991 radical SAM domain-containing protein; SPTR: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; PFAM: Radical SAM domain protein.
  
     0.433
SMB96927.1
Nucleoside-triphosphatase; InterPro IPR011704:IPR004948:IPR003593; COGs: COG1618 nucleotide kinase; KEGG: adg:Adeg_0940 protein of unknown function DUF265; SPTR: Putative GTPase domain, era and thdf protein; SMART: AAA ATPase; PFAM: protein of unknown function DUF265; ATPase associated with various cellular activities AAA_5; PRIAM: Nucleoside-triphosphatase.
  
     0.421
Your Current Organism:
Thermanaeromonas toyohensis
NCBI taxonomy Id: 698762
Other names: T. toyohensis ToBE, Thermanaeromonas toyohensis DSM 14490, Thermanaeromonas toyohensis ToBE, Thermanaeromonas toyohensis str. ToBE, Thermanaeromonas toyohensis strain ToBE, Thermoanaerobacter sp. ToBE
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