STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000934755_00405Unannotated protein. (66 aa)    
Predicted Functional Partners:
GCA_000934755_03097
Unannotated protein.
     
 0.974
GCA_000934755_02714
Unannotated protein.
 
 
 0.972
GCA_000934755_02214
Unannotated protein.
  
 
 0.967
GCA_000934755_03800
Unannotated protein.
  
 
 0.967
GCA_000934755_03293
Unannotated protein.
    
   0.773
GCA_000934755_03618
Unannotated protein.
   
 
 0.725
GCA_000934755_01157
Unannotated protein.
  
   0.600
GCA_000934755_00406
Unannotated protein.
       0.565
GCA_000934755_01991
Unannotated protein.
  
  
 0.560
GCA_000934755_01745
Unannotated protein.
  
  
 0.559
Your Current Organism:
Desulfonatronovibrio magnus
NCBI taxonomy Id: 698827
Other names: D. magnus, DSM 24400, Desulfonatronovibrio magnus Sorokin et al. 2011, Desulfonatronovibrio sp. AHT22, UNIQEM U844, strain AHT22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.