STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000934755_02005Unannotated protein. (419 aa)    
Predicted Functional Partners:
GCA_000934755_01195
Unannotated protein.
 
 0.999
GCA_000934755_00326
Unannotated protein.
 
 
 0.893
GCA_000934755_02262
Unannotated protein.
 
  
 0.891
GCA_000934755_02985
Unannotated protein.
 
    
 0.874
GCA_000934755_00293
Unannotated protein.
  
 
 0.865
GCA_000934755_02015
Unannotated protein.
    
 0.862
GCA_000934755_01876
Unannotated protein.
   
 0.798
GCA_000934755_02016
Unannotated protein.
     
 0.796
GCA_000934755_02453
Unannotated protein.
    
   0.781
GCA_000934755_02623
Unannotated protein.
    
   0.781
Your Current Organism:
Desulfonatronovibrio magnus
NCBI taxonomy Id: 698827
Other names: D. magnus, DSM 24400, Desulfonatronovibrio magnus Sorokin et al. 2011, Desulfonatronovibrio sp. AHT22, UNIQEM U844, strain AHT22
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.