Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFH53395.1 | SFH53421.1 | SAMN05192551_101402 | SAMN05192551_101403 | DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains. | Signal transduction histidine kinase. | 0.985 |
SFH53395.1 | SFH54869.1 | SAMN05192551_101402 | SAMN05192551_101467 | DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains. | Hypothetical protein. | 0.991 |
SFH53395.1 | SFH58844.1 | SAMN05192551_101402 | SAMN05192551_101666 | DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains. | Hypothetical protein. | 0.968 |
SFH53395.1 | SFH66532.1 | SAMN05192551_101402 | SAMN05192551_10268 | DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains. | PAS domain S-box-containing protein. | 0.986 |
SFH53395.1 | SFH68582.1 | SAMN05192551_101402 | SAMN05192551_102161 | DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains. | Two-component system, chemotaxis family, CheB/CheR fusion protein. | 0.548 |
SFH53395.1 | SFH77962.1 | SAMN05192551_101402 | SAMN05192551_10319 | DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains. | Hypothetical protein. | 0.984 |
SFH53395.1 | SFI20222.1 | SAMN05192551_101402 | SAMN05192551_10876 | DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains. | PAS domain S-box-containing protein. | 0.943 |
SFH53421.1 | SFH53395.1 | SAMN05192551_101403 | SAMN05192551_101402 | Signal transduction histidine kinase. | DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains. | 0.985 |
SFH53421.1 | SFH54869.1 | SAMN05192551_101403 | SAMN05192551_101467 | Signal transduction histidine kinase. | Hypothetical protein. | 0.919 |
SFH53421.1 | SFH58039.1 | SAMN05192551_101403 | SAMN05192551_101627 | Signal transduction histidine kinase. | DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains. | 0.936 |
SFH53421.1 | SFH58844.1 | SAMN05192551_101403 | SAMN05192551_101666 | Signal transduction histidine kinase. | Hypothetical protein. | 0.784 |
SFH53421.1 | SFH58864.1 | SAMN05192551_101403 | SAMN05192551_101667 | Signal transduction histidine kinase. | DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains. | 0.937 |
SFH53421.1 | SFH66532.1 | SAMN05192551_101403 | SAMN05192551_10268 | Signal transduction histidine kinase. | PAS domain S-box-containing protein. | 0.780 |
SFH53421.1 | SFH68582.1 | SAMN05192551_101403 | SAMN05192551_102161 | Signal transduction histidine kinase. | Two-component system, chemotaxis family, CheB/CheR fusion protein. | 0.787 |
SFH53421.1 | SFH77962.1 | SAMN05192551_101403 | SAMN05192551_10319 | Signal transduction histidine kinase. | Hypothetical protein. | 0.812 |
SFH53421.1 | SFH83036.1 | SAMN05192551_101403 | SAMN05192551_103196 | Signal transduction histidine kinase. | DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains. | 0.934 |
SFH53421.1 | SFI20222.1 | SAMN05192551_101403 | SAMN05192551_10876 | Signal transduction histidine kinase. | PAS domain S-box-containing protein. | 0.858 |
SFH54869.1 | SFH53395.1 | SAMN05192551_101467 | SAMN05192551_101402 | Hypothetical protein. | DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains. | 0.991 |
SFH54869.1 | SFH53421.1 | SAMN05192551_101467 | SAMN05192551_101403 | Hypothetical protein. | Signal transduction histidine kinase. | 0.919 |
SFH54869.1 | SFH58039.1 | SAMN05192551_101467 | SAMN05192551_101627 | Hypothetical protein. | DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains. | 0.993 |
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