Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFH57654.1 | SFH57698.1 | SAMN05192551_101607 | SAMN05192551_101609 | DNA-binding transcriptional response regulator, NtrC family, contains REC, AAA-type ATPase, and a Fis-type DNA-binding domains. | TRAP transporter, 4TM/12TM fusion protein. | 0.587 |
SFH57654.1 | SFH57715.1 | SAMN05192551_101607 | SAMN05192551_101610 | DNA-binding transcriptional response regulator, NtrC family, contains REC, AAA-type ATPase, and a Fis-type DNA-binding domains. | Hypothetical protein. | 0.517 |
SFH57654.1 | SFH68408.1 | SAMN05192551_101607 | SAMN05192551_102152 | DNA-binding transcriptional response regulator, NtrC family, contains REC, AAA-type ATPase, and a Fis-type DNA-binding domains. | TRAP transporter, DctM subunit. | 0.441 |
SFH57698.1 | SFH57654.1 | SAMN05192551_101609 | SAMN05192551_101607 | TRAP transporter, 4TM/12TM fusion protein. | DNA-binding transcriptional response regulator, NtrC family, contains REC, AAA-type ATPase, and a Fis-type DNA-binding domains. | 0.587 |
SFH57698.1 | SFH57715.1 | SAMN05192551_101609 | SAMN05192551_101610 | TRAP transporter, 4TM/12TM fusion protein. | Hypothetical protein. | 0.966 |
SFH57698.1 | SFH68366.1 | SAMN05192551_101609 | SAMN05192551_102150 | TRAP transporter, 4TM/12TM fusion protein. | TRAP-type C4-dicarboxylate transport system, substrate-binding protein. | 0.648 |
SFH57698.1 | SFH68408.1 | SAMN05192551_101609 | SAMN05192551_102152 | TRAP transporter, 4TM/12TM fusion protein. | TRAP transporter, DctM subunit. | 0.626 |
SFH57698.1 | SFH72391.1 | SAMN05192551_101609 | SAMN05192551_102340 | TRAP transporter, 4TM/12TM fusion protein. | Hypothetical protein. | 0.925 |
SFH57698.1 | SFH72415.1 | SAMN05192551_101609 | SAMN05192551_102341 | TRAP transporter, 4TM/12TM fusion protein. | Protein of unknown function. | 0.609 |
SFH57698.1 | SFH91563.1 | SAMN05192551_101609 | SAMN05192551_104158 | TRAP transporter, 4TM/12TM fusion protein. | Hypothetical protein. | 0.611 |
SFH57698.1 | SFH91593.1 | SAMN05192551_101609 | SAMN05192551_104159 | TRAP transporter, 4TM/12TM fusion protein. | Hypothetical protein. | 0.925 |
SFH57698.1 | SFI08269.1 | SAMN05192551_101609 | SAMN05192551_10671 | TRAP transporter, 4TM/12TM fusion protein. | Hypothetical protein. | 0.690 |
SFH57698.1 | SFI08297.1 | SAMN05192551_101609 | SAMN05192551_10672 | TRAP transporter, 4TM/12TM fusion protein. | Hypothetical protein. | 0.925 |
SFH57715.1 | SFH57654.1 | SAMN05192551_101610 | SAMN05192551_101607 | Hypothetical protein. | DNA-binding transcriptional response regulator, NtrC family, contains REC, AAA-type ATPase, and a Fis-type DNA-binding domains. | 0.517 |
SFH57715.1 | SFH57698.1 | SAMN05192551_101610 | SAMN05192551_101609 | Hypothetical protein. | TRAP transporter, 4TM/12TM fusion protein. | 0.966 |
SFH57715.1 | SFH68366.1 | SAMN05192551_101610 | SAMN05192551_102150 | Hypothetical protein. | TRAP-type C4-dicarboxylate transport system, substrate-binding protein. | 0.555 |
SFH57715.1 | SFH68408.1 | SAMN05192551_101610 | SAMN05192551_102152 | Hypothetical protein. | TRAP transporter, DctM subunit. | 0.577 |
SFH57715.1 | SFH72415.1 | SAMN05192551_101610 | SAMN05192551_102341 | Hypothetical protein. | Protein of unknown function. | 0.571 |
SFH57715.1 | SFH91563.1 | SAMN05192551_101610 | SAMN05192551_104158 | Hypothetical protein. | Hypothetical protein. | 0.597 |
SFH57715.1 | SFI08269.1 | SAMN05192551_101610 | SAMN05192551_10671 | Hypothetical protein. | Hypothetical protein. | 0.676 |
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