STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFH58402.1DNA-binding transcriptional regulator, FrmR family. (86 aa)    
Predicted Functional Partners:
SFH94095.1
DNA-binding transcriptional regulator, FrmR family.
  
    0.772
SFH58384.1
Two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP.
     
 0.723
SFH94023.1
Cu2+-exporting ATPase/Cu+-exporting ATPase.
  
  
 0.701
SFH94066.1
Cu+-exporting ATPase.
  
  
 0.701
SFI08916.1
Cd2+/Zn2+-exporting ATPase.
  
  
 0.701
SFH50050.1
Flagellar motor switch protein FliN/FliY.
    
   0.691
SFH49699.1
RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
    
   0.633
SFI19990.1
RNA polymerase, sigma 37 subunit, RpsB/SigB; Belongs to the sigma-70 factor family.
    
   0.633
SFH58362.1
PAS/PAC sensor signal transduction histidine kinase.
       0.596
SFH93165.1
Putative glutamine amidotransferase.
   
    0.591
Your Current Organism:
Tindallia magadiensis
NCBI taxonomy Id: 69895
Other names: DSM 10318, T. magadiensis, Tindallia magadii, strain Z-7934
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.