Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFH53597.1 | SFH59252.1 | SAMN05192551_101411 | SAMN05192551_101687 | 5-methyltetrahydrofolate--homocysteine methyltransferase. | CBS domain-containing protein. | 0.690 |
SFH53597.1 | SFI09291.1 | SAMN05192551_101411 | SAMN05192551_106113 | 5-methyltetrahydrofolate--homocysteine methyltransferase. | GMP synthase (glutamine-hydrolysing). | 0.743 |
SFH53597.1 | guaA | SAMN05192551_101411 | SAMN05192551_102321 | 5-methyltetrahydrofolate--homocysteine methyltransferase. | GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | 0.743 |
SFH53597.1 | guaB | SAMN05192551_101411 | SAMN05192551_102320 | 5-methyltetrahydrofolate--homocysteine methyltransferase. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.943 |
SFH53597.1 | purH | SAMN05192551_101411 | SAMN05192551_102332 | 5-methyltetrahydrofolate--homocysteine methyltransferase. | IMP cyclohydrolase. | 0.875 |
SFH59232.1 | SFH59252.1 | SAMN05192551_101686 | SAMN05192551_101687 | PAS domain S-box-containing protein. | CBS domain-containing protein. | 0.555 |
SFH59252.1 | SFH53597.1 | SAMN05192551_101687 | SAMN05192551_101411 | CBS domain-containing protein. | 5-methyltetrahydrofolate--homocysteine methyltransferase. | 0.690 |
SFH59252.1 | SFH59232.1 | SAMN05192551_101687 | SAMN05192551_101686 | CBS domain-containing protein. | PAS domain S-box-containing protein. | 0.555 |
SFH59252.1 | SFH59271.1 | SAMN05192551_101687 | SAMN05192551_101688 | CBS domain-containing protein. | Sulfur carrier protein ThiS (thiamine biosynthesis). | 0.545 |
SFH59252.1 | SFH59293.1 | SAMN05192551_101687 | SAMN05192551_101689 | CBS domain-containing protein. | Aldehyde:ferredoxin oxidoreductase. | 0.534 |
SFH59252.1 | SFI09075.1 | SAMN05192551_101687 | SAMN05192551_106103 | CBS domain-containing protein. | Manganese-dependent inorganic pyrophosphatase. | 0.723 |
SFH59252.1 | SFI09291.1 | SAMN05192551_101687 | SAMN05192551_106113 | CBS domain-containing protein. | GMP synthase (glutamine-hydrolysing). | 0.946 |
SFH59252.1 | SFI09985.1 | SAMN05192551_101687 | SAMN05192551_106145 | CBS domain-containing protein. | 5'-nucleotidase; Belongs to the 5'-nucleotidase family. | 0.688 |
SFH59252.1 | guaA | SAMN05192551_101687 | SAMN05192551_102321 | CBS domain-containing protein. | GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | 0.946 |
SFH59252.1 | guaB | SAMN05192551_101687 | SAMN05192551_102320 | CBS domain-containing protein. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.844 |
SFH59252.1 | purH | SAMN05192551_101687 | SAMN05192551_102332 | CBS domain-containing protein. | IMP cyclohydrolase. | 0.528 |
SFH59271.1 | SFH59252.1 | SAMN05192551_101688 | SAMN05192551_101687 | Sulfur carrier protein ThiS (thiamine biosynthesis). | CBS domain-containing protein. | 0.545 |
SFH59271.1 | SFH59293.1 | SAMN05192551_101688 | SAMN05192551_101689 | Sulfur carrier protein ThiS (thiamine biosynthesis). | Aldehyde:ferredoxin oxidoreductase. | 0.757 |
SFH59293.1 | SFH59252.1 | SAMN05192551_101689 | SAMN05192551_101687 | Aldehyde:ferredoxin oxidoreductase. | CBS domain-containing protein. | 0.534 |
SFH59293.1 | SFH59271.1 | SAMN05192551_101689 | SAMN05192551_101688 | Aldehyde:ferredoxin oxidoreductase. | Sulfur carrier protein ThiS (thiamine biosynthesis). | 0.757 |
page 1 of 3