STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFH66847.1Phosphonate transport system permease protein. (525 aa)    
Predicted Functional Partners:
phnC
Phosphonate transport system ATP-binding protein; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.
 
 
 0.996
SFH66804.1
Phosphonate transport system substrate-binding protein.
 
 
 0.994
SFH66863.1
Diguanylate cyclase (GGDEF) domain-containing protein.
  
    0.642
SFH58333.1
Phosphate ABC transporter substrate-binding protein, PhoT family.
  
 
 0.578
SFH83093.1
Phosphate ABC transporter substrate-binding protein, PhoT family.
  
 
 0.578
SFH54869.1
Hypothetical protein.
   
 
  0.534
ftsE
Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division.
    
  0.522
SFI27853.1
ModE molybdate transport repressor domain-containing protein; Belongs to the LysR transcriptional regulatory family.
  
  
  0.520
SFH56541.1
Putative ABC transport system ATP-binding protein.
  
  
  0.493
topB
DNA topoisomerase-3; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]
       0.474
Your Current Organism:
Tindallia magadiensis
NCBI taxonomy Id: 69895
Other names: DSM 10318, T. magadiensis, Tindallia magadii, strain Z-7934
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