Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFH60153.1 | SFH81227.1 | SAMN05192551_101732 | SAMN05192551_103133 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | Hypothetical protein. | 0.869 |
SFH60153.1 | SFH81287.1 | SAMN05192551_101732 | SAMN05192551_103135 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | Hypothetical protein. | 0.869 |
SFH60153.1 | SFI08688.1 | SAMN05192551_101732 | SAMN05192551_10687 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | Predicted amidohydrolase. | 0.873 |
SFH60153.1 | aroK | SAMN05192551_101732 | SAMN05192551_101147 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family. | 0.826 |
SFH60153.1 | guaB | SAMN05192551_101732 | SAMN05192551_102320 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.895 |
SFH81056.1 | SFH81227.1 | SAMN05192551_103127 | SAMN05192551_103133 | dTDP-4-amino-4,6-dideoxygalactose transaminase; Belongs to the DegT/DnrJ/EryC1 family. | Hypothetical protein. | 0.652 |
SFH81056.1 | SFH81287.1 | SAMN05192551_103127 | SAMN05192551_103135 | dTDP-4-amino-4,6-dideoxygalactose transaminase; Belongs to the DegT/DnrJ/EryC1 family. | Hypothetical protein. | 0.634 |
SFH81056.1 | SFI08688.1 | SAMN05192551_103127 | SAMN05192551_10687 | dTDP-4-amino-4,6-dideoxygalactose transaminase; Belongs to the DegT/DnrJ/EryC1 family. | Predicted amidohydrolase. | 0.786 |
SFH81056.1 | guaB | SAMN05192551_103127 | SAMN05192551_102320 | dTDP-4-amino-4,6-dideoxygalactose transaminase; Belongs to the DegT/DnrJ/EryC1 family. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.601 |
SFH81200.1 | SFH81227.1 | SAMN05192551_103132 | SAMN05192551_103133 | Hypothetical protein. | Hypothetical protein. | 0.773 |
SFH81200.1 | SFH81254.1 | SAMN05192551_103132 | SAMN05192551_103134 | Hypothetical protein. | Sulfotransferase family protein. | 0.625 |
SFH81200.1 | SFH81287.1 | SAMN05192551_103132 | SAMN05192551_103135 | Hypothetical protein. | Hypothetical protein. | 0.625 |
SFH81200.1 | SFH81323.1 | SAMN05192551_103132 | SAMN05192551_103136 | Hypothetical protein. | Sulfotransferase family protein. | 0.464 |
SFH81200.1 | SFH81356.1 | SAMN05192551_103132 | SAMN05192551_103137 | Hypothetical protein. | Hypothetical protein. | 0.464 |
SFH81227.1 | SFH60153.1 | SAMN05192551_103133 | SAMN05192551_101732 | Hypothetical protein. | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 0.869 |
SFH81227.1 | SFH81056.1 | SAMN05192551_103133 | SAMN05192551_103127 | Hypothetical protein. | dTDP-4-amino-4,6-dideoxygalactose transaminase; Belongs to the DegT/DnrJ/EryC1 family. | 0.652 |
SFH81227.1 | SFH81200.1 | SAMN05192551_103133 | SAMN05192551_103132 | Hypothetical protein. | Hypothetical protein. | 0.773 |
SFH81227.1 | SFH81254.1 | SAMN05192551_103133 | SAMN05192551_103134 | Hypothetical protein. | Sulfotransferase family protein. | 0.630 |
SFH81227.1 | SFH81287.1 | SAMN05192551_103133 | SAMN05192551_103135 | Hypothetical protein. | Hypothetical protein. | 0.625 |
SFH81227.1 | SFH81323.1 | SAMN05192551_103133 | SAMN05192551_103136 | Hypothetical protein. | Sulfotransferase family protein. | 0.471 |
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