STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFH81965.1Alanine or glycine:cation symporter, AGCS family. (478 aa)    
Predicted Functional Partners:
SFH81938.1
Uncharacterized protein YcsI, UPF0317 family; Belongs to the D-glutamate cyclase family.
       0.513
SFI26014.1
Chloride channel protein, CIC family.
   
    0.451
purD
Phosphoribosylamine--glycine ligase; Belongs to the GARS family.
    
  0.448
SFH56922.1
CDP-diacylglycerol--serine O-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
    
  0.446
SFH81892.1
Hypothetical protein.
     
 0.441
SFH81914.1
Imidazolonepropionase.
       0.437
SFH82004.1
Two-component system, sensor histidine kinase YcbA.
     
 0.434
SFH82034.1
Two-component system, response regulator YcbB.
     
 0.428
Your Current Organism:
Tindallia magadiensis
NCBI taxonomy Id: 69895
Other names: DSM 10318, T. magadiensis, Tindallia magadii, strain Z-7934
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.