STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFH78383.1Na+/H+ antiporter NhaC. (447 aa)    
Predicted Functional Partners:
SFH78351.1
Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.
       0.755
SFI26238.1
Transporter, NhaC family.
  
     0.491
SFH78301.1
[methyl-Co(III) methanol-specific corrinoid protein]:coenzyme M methyltransferase; Belongs to the uroporphyrinogen decarboxylase family.
       0.467
SFH78323.1
Uncharacterized 2Fe-2 and 4Fe-4S clusters-containing protein, contains DUF4445 domain.
       0.467
SFH78277.1
Methyltransferase cognate corrinoid proteins.
       0.420
Your Current Organism:
Tindallia magadiensis
NCBI taxonomy Id: 69895
Other names: DSM 10318, T. magadiensis, Tindallia magadii, strain Z-7934
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.