STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFH91593.1Hypothetical protein. (340 aa)    
Predicted Functional Partners:
SFH91537.1
TRAP transporter, 4TM/12TM fusion protein.
 
 
  0.960
SFH57698.1
TRAP transporter, 4TM/12TM fusion protein.
 
 
  0.925
SFH72445.1
TRAP transporter, 4TM/12TM fusion protein.
 
 
  0.925
SFH91563.1
Hypothetical protein.
 
 
  0.821
SFI08269.1
Hypothetical protein.
 
 
  0.729
SFH68582.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
 
 
  0.725
SFH72415.1
Protein of unknown function.
 
 
  0.591
SFH68408.1
TRAP transporter, DctM subunit.
  
  
  0.589
SFH68366.1
TRAP-type C4-dicarboxylate transport system, substrate-binding protein.
  
  
 0.567
SFH68387.1
TRAP-type C4-dicarboxylate transport system, small permease component.
  
  
  0.512
Your Current Organism:
Tindallia magadiensis
NCBI taxonomy Id: 69895
Other names: DSM 10318, T. magadiensis, Tindallia magadii, strain Z-7934
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.