STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFH87799.1Glycosyl hydrolases family 18. (569 aa)    
Predicted Functional Partners:
SFH87772.1
Gamma-glutamyltranspeptidase / glutathione hydrolase.
 
     0.719
SFH87750.1
Hypothetical protein.
       0.603
SFH58618.1
beta-N-acetylhexosaminidase.
     
 0.521
SFH70036.1
Flagellar operon protein TIGR03826.
  
    0.488
glnS
glutaminyl-tRNA synthetase.
 
     0.488
SFH87821.1
Hypothetical protein.
       0.486
SFH80280.1
Copper amine oxidase N-terminal domain-containing protein.
 
   
 0.478
SFI10727.1
Copper amine oxidase N-terminal domain-containing protein.
  
     0.474
SFH45440.1
S-layer homology domain-containing protein.
 
     0.470
SFI16907.1
Chemotaxis protein MotB.
 
     0.469
Your Current Organism:
Tindallia magadiensis
NCBI taxonomy Id: 69895
Other names: DSM 10318, T. magadiensis, Tindallia magadii, strain Z-7934
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.