STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFH98661.1Uncharacterized membrane protein YfcA. (287 aa)    
Predicted Functional Partners:
SFH69638.1
D-proline reductase (dithiol) PrdE.
 
     0.809
SFH90488.1
Uroporphyrinogen III methyltransferase / synthase.
    
 0.795
SFH69618.1
D-proline reductase (dithiol) PrdA/D-proline reductase (dithiol) PrdD.
 
     0.785
SFH83391.1
Glycine/sarcosine/betaine reductase component B subunits.
 
     0.783
SFH69586.1
Hypothetical protein.
 
     0.781
SFH69568.1
D-proline reductase (dithiol) PrdA.
 
     0.778
SFH83303.1
D-proline reductase (dithiol) PrdA.
 
     0.772
SFH69600.1
D-proline reductase (dithiol) PrdB.
 
     0.770
SFH83361.1
D-proline reductase (dithiol) PrdB.
 
     0.744
SFH69553.1
Proline reductase-associated electron transfer protein PrdC.
 
     0.716
Your Current Organism:
Tindallia magadiensis
NCBI taxonomy Id: 69895
Other names: DSM 10318, T. magadiensis, Tindallia magadii, strain Z-7934
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.