STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFI11498.1Two component transcriptional regulator, LytTR family. (260 aa)    
Predicted Functional Partners:
SFI11532.1
Two-component system, LytT family, sensor histidine kinase LytS.
 
 0.998
SFH93020.1
PAS domain S-box-containing protein.
  
 0.973
SFH56755.1
Two-component system, sensor histidine kinase YesM.
 
 
 0.944
SFH55865.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
  
 0.929
SFI20222.1
PAS domain S-box-containing protein.
 
  
 0.798
SFI32512.1
His Kinase A (phospho-acceptor) domain-containing protein.
 
  
 0.780
proA
Glutamate-5-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family.
    
 
 0.759
SFH54869.1
Hypothetical protein.
 
  
 0.735
SFI11452.1
Carbon starvation protein.
 
   
 0.714
SFH66532.1
PAS domain S-box-containing protein.
 
  
 0.704
Your Current Organism:
Tindallia magadiensis
NCBI taxonomy Id: 69895
Other names: DSM 10318, T. magadiensis, Tindallia magadii, strain Z-7934
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.