STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFI26816.1Amino acid ABC transporter substrate-binding protein, PAAT family. (278 aa)    
Predicted Functional Partners:
SFI26783.1
Signal transduction histidine kinase.
 
  
  0.910
SFI26754.1
Response regulator receiver domain-containing protein.
 
  
  0.845
SFI20246.1
PAS domain S-box-containing protein.
 
 
 0.823
SFH54869.1
Hypothetical protein.
   
 0.792
SFH58844.1
Hypothetical protein.
   
 0.787
SFH66532.1
PAS domain S-box-containing protein.
   
 0.784
SFH92690.1
PAS domain S-box-containing protein.
   
 0.784
SFH55865.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
 
 0.773
SFH47871.1
LPXTG-motif cell wall anchor domain-containing protein/TQXA domain-containing protein.
  
  
 0.751
SFH77962.1
Hypothetical protein.
   
 0.740
Your Current Organism:
Tindallia magadiensis
NCBI taxonomy Id: 69895
Other names: DSM 10318, T. magadiensis, Tindallia magadii, strain Z-7934
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.