STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFI41307.1Hypothetical protein. (308 aa)    
Predicted Functional Partners:
SFI41335.1
Winged helix-turn-helix DNA-binding.
     0.991
SFI41276.1
DNA replication protein DnaC.
  
 0.952
SFI41402.1
IstB-like ATP binding protein.
 
  
 0.891
SFI41529.1
IstB-like ATP binding protein.
  
 0.856
SFI41371.1
Homeodomain-like domain-containing protein.
 
    
0.628
SFI41250.1
Transposase InsO and inactivated derivatives.
       0.423
SFI41431.1
Site-specific recombinase XerD; Belongs to the 'phage' integrase family.
       0.420
SFI41469.1
Site-specific recombinase XerD.
       0.420
SFI41499.1
Site-specific recombinase XerD; Belongs to the 'phage' integrase family.
       0.420
Your Current Organism:
Tindallia magadiensis
NCBI taxonomy Id: 69895
Other names: DSM 10318, T. magadiensis, Tindallia magadii, strain Z-7934
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.