STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFI41860.1Methyltransferase domain-containing protein. (207 aa)    
Predicted Functional Partners:
cysC
Bifunctional enzyme CysN/CysC; Catalyzes the synthesis of activated sulfate. Belongs to the APS kinase family.
  
 
 0.743
SFH65809.1
NADH-quinone oxidoreductase subunit F.
    
 0.702
SFH53597.1
5-methyltetrahydrofolate--homocysteine methyltransferase.
    
 0.653
SFH59801.1
Methionine-gamma-lyase.
  
 
 0.637
SFI27829.1
Flavodoxin-like fold.
     
 0.626
SFH91324.1
Cysteine synthase A; Belongs to the cysteine synthase/cystathionine beta- synthase family.
 
 
 0.601
SFH84449.1
Cysteine synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
 
 
 0.592
SFH48400.1
Farnesyl-diphosphate synthase; Belongs to the FPP/GGPP synthase family.
 
 
 0.579
SFI35506.1
Methyltransferase domain-containing protein.
  
 0.577
bioB
Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family.
  
 
 0.542
Your Current Organism:
Tindallia magadiensis
NCBI taxonomy Id: 69895
Other names: DSM 10318, T. magadiensis, Tindallia magadii, strain Z-7934
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