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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cbiO1ABC-type cobalt transport system, ATP-binding protein. (579 aa)    
Predicted Functional Partners:
cbiQ1
Cobalt (Co2+) ABC superfamily, ATP binding cassette transporter.
 0.999
cbiQ2
ABC-type cobalt transport system, permease component.
  
 
 0.943
CCP88205.1
Conserved hypothetical protein.
 
  
 0.924
dppD
ABC-type dipeptide/oligopeptide transport system, ATPase componen.
  
  
0.775
cbiO3
ABC-type Cobalt import ATP-binding protein CbiO.
 
 
0.755
cbiO2
Cobalt transporter subunit, ATPase; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 
 
0.753
dppC
ABC-type dipeptide transport system, permease protein DppC.
  
  
 0.713
dppB
ABC-type dipeptide/oligopeptide transport system, permease component.
 
  
 0.709
valS
Valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.
  
    0.550
dppA
ABC-type dipeptide-binding protein, solute binding protein.
  
  
 0.443
Your Current Organism:
Phytoplasma solani
NCBI taxonomy Id: 69896
Other names: C. Phytoplasma solani, Candidatus Phytoplasma solani, Stolbur phytoplasma, strain STOL11
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