STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
potASpermidine/putrescine ABC transporter, ATPase; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family. (418 aa)    
Predicted Functional Partners:
potB
Spermidine/putrescine ABC transporter, permease protein.
 
 0.998
potD
ABC-type spermidine/putrescine transport system, permease component.
 
 
 0.997
potC
ABC-type spermidine/putrescine-binding periplasmic protein.
 
 
 0.995
nadE
NAD+ synthetase; In the C-terminal section; belongs to the NAD synthetase family.
  
  
 0.480
znuB1
Zinc/manganese ABC transporter subunit.
     
 0.427
znuB2
Zinc/manganese ABC transporter subunit.
     
 0.427
dppA
ABC-type dipeptide-binding protein, solute binding protein.
    
 0.424
phnL
ABC transporter, ATPase component; Belongs to the ABC transporter superfamily. Macrolide exporter (TC 3.A.1.122) family.
 
  
0.411
Your Current Organism:
Phytoplasma solani
NCBI taxonomy Id: 69896
Other names: C. Phytoplasma solani, Candidatus Phytoplasma solani, Stolbur phytoplasma, strain STOL11
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