EFD94443.1 protein (Megasphaera genomosp.) - STRING interaction network

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second shell of interactors

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proteins of unknown 3D structure

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Score

EFD94443.1

Flavodoxin; Identified by match to protein family HMM PF00258. (144 aa)

Predicted Functional Partners:

tonB-8

0.733

tonB-7

0.731

EFD93676.1

0.723

tonB-9

0.710

tonB-4

0.703

EFD93470.1

0.681

EFD94032.1

0.680

EFD93478.1

0.677

EFD94364.1

0.673

EFD93628.1

0.671

Your Current Organism:

Megasphaera genomosp.

NCBI taxonomy Id: 699218
Other names: M. genomosp. type_1 str. 28L, Megasphaera genomosp. type_1 str. 28L

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EFD93470.1	EFD93478.1	HMPREF0889_0138	HMPREF0889_1544	Hypothetical protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by glimmer; putative.	Hep/Hag repeat protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF05658; match to protein family HMM PF05662.	0.774
EFD93470.1	EFD93628.1	HMPREF0889_0138	HMPREF0889_0430	Hypothetical protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by glimmer; putative.	Hypothetical protein; Identified by glimmer; putative.	0.774
EFD93470.1	EFD93676.1	HMPREF0889_0138	HMPREF0889_1026	Hypothetical protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by glimmer; putative.	Arylsulfatase; Identified by match to protein family HMM PF00884.	0.525
EFD93470.1	EFD94032.1	HMPREF0889_0138	HMPREF0889_1579	Hypothetical protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by glimmer; putative.	Identified by match to protein family HMM PF00395.	0.774
EFD93470.1	EFD94443.1	HMPREF0889_0138	HMPREF0889_0502	Hypothetical protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by glimmer; putative.	Flavodoxin; Identified by match to protein family HMM PF00258.	0.681
EFD93470.1	tonB-4	HMPREF0889_0138	HMPREF0889_0579	Hypothetical protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by glimmer; putative.	TonB-dependent receptor plug domain protein; Identified by match to protein family HMM PF00593; match to protein family HMM PF07715.	0.774
EFD93470.1	tonB-7	HMPREF0889_0138	HMPREF0889_0994	Hypothetical protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by glimmer; putative.	TonB-dependent receptor plug domain protein; Identified by match to protein family HMM PF00593; match to protein family HMM PF07715.	0.771
EFD93470.1	tonB-8	HMPREF0889_0138	HMPREF0889_0995	Hypothetical protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by glimmer; putative.	TonB-dependent receptor plug domain protein; Identified by match to protein family HMM PF00593; match to protein family HMM PF07715.	0.769
EFD93470.1	tonB-9	HMPREF0889_0138	HMPREF0889_1580	Hypothetical protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by glimmer; putative.	Putative colicin I receptor; Identified by match to protein family HMM PF00593; match to protein family HMM PF07715.	0.774
EFD93478.1	EFD93470.1	HMPREF0889_1544	HMPREF0889_0138	Hep/Hag repeat protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF05658; match to protein family HMM PF05662.	Hypothetical protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by glimmer; putative.	0.774
EFD93478.1	EFD93628.1	HMPREF0889_1544	HMPREF0889_0430	Hep/Hag repeat protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF05658; match to protein family HMM PF05662.	Hypothetical protein; Identified by glimmer; putative.	0.774
EFD93478.1	EFD93676.1	HMPREF0889_1544	HMPREF0889_1026	Hep/Hag repeat protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF05658; match to protein family HMM PF05662.	Arylsulfatase; Identified by match to protein family HMM PF00884.	0.614
EFD93478.1	EFD94032.1	HMPREF0889_1544	HMPREF0889_1579	Hep/Hag repeat protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF05658; match to protein family HMM PF05662.	Identified by match to protein family HMM PF00395.	0.773
EFD93478.1	EFD94364.1	HMPREF0889_1544	HMPREF0889_1346	Hep/Hag repeat protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF05658; match to protein family HMM PF05662.	Hep/Hag repeat protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF05658; match to protein family HMM PF05662.	0.774
EFD93478.1	EFD94443.1	HMPREF0889_1544	HMPREF0889_0502	Hep/Hag repeat protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF05658; match to protein family HMM PF05662.	Flavodoxin; Identified by match to protein family HMM PF00258.	0.677
EFD93478.1	tonB-4	HMPREF0889_1544	HMPREF0889_0579	Hep/Hag repeat protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF05658; match to protein family HMM PF05662.	TonB-dependent receptor plug domain protein; Identified by match to protein family HMM PF00593; match to protein family HMM PF07715.	0.773
EFD93478.1	tonB-7	HMPREF0889_1544	HMPREF0889_0994	Hep/Hag repeat protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF05658; match to protein family HMM PF05662.	TonB-dependent receptor plug domain protein; Identified by match to protein family HMM PF00593; match to protein family HMM PF07715.	0.760
EFD93478.1	tonB-8	HMPREF0889_1544	HMPREF0889_0995	Hep/Hag repeat protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF05658; match to protein family HMM PF05662.	TonB-dependent receptor plug domain protein; Identified by match to protein family HMM PF00593; match to protein family HMM PF07715.	0.751
EFD93478.1	tonB-9	HMPREF0889_1544	HMPREF0889_1580	Hep/Hag repeat protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF05658; match to protein family HMM PF05662.	Putative colicin I receptor; Identified by match to protein family HMM PF00593; match to protein family HMM PF07715.	0.773
EFD93628.1	EFD93470.1	HMPREF0889_0430	HMPREF0889_0138	Hypothetical protein; Identified by glimmer; putative.	Hypothetical protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by glimmer; putative.	0.774