EFD94448.1 protein (Megasphaera genomosp.) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

EFD94448.1

2-hydroxyglutaryl-CoA dehydratase, D-component; Identified by match to protein family HMM PF06050. (428 aa)

Predicted Functional Partners:

EFD94447.1

0.998

hgdC

0.990

EFD94451.1

0.923

EFD94446.1

0.891

EFD94628.1

0.851

EFD93774.1

0.851

EFD94450.1

0.840

EFD94331.1

0.834

EFD94501.1

0.462

EFD94742.1

0.423

Your Current Organism:

Megasphaera genomosp.

NCBI taxonomy Id: 699218
Other names: M. genomosp. type_1 str. 28L, Megasphaera genomosp. type_1 str. 28L

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EFD93774.1	EFD94446.1	HMPREF0889_1128	HMPREF0889_0505	butyryl-CoA dehydrogenase; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028.	butyryl-CoA dehydrogenase; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028.	0.758
EFD93774.1	EFD94447.1	HMPREF0889_1128	HMPREF0889_0506	butyryl-CoA dehydrogenase; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028.	2-hydroxyglutaryl-CoA dehydratase, D-component; Identified by match to protein family HMM PF06050.	0.848
EFD93774.1	EFD94448.1	HMPREF0889_1128	HMPREF0889_0507	butyryl-CoA dehydrogenase; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028.	2-hydroxyglutaryl-CoA dehydratase, D-component; Identified by match to protein family HMM PF06050.	0.851
EFD93774.1	EFD94451.1	HMPREF0889_1128	HMPREF0889_0510	butyryl-CoA dehydrogenase; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028.	CoA transferase; Identified by match to protein family HMM PF01144; Belongs to the 3-oxoacid CoA-transferase family.	0.860
EFD93774.1	EFD94628.1	HMPREF0889_1128	HMPREF0889_0044	butyryl-CoA dehydrogenase; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028.	CoA transferase; Identified by match to protein family HMM PF01144; Belongs to the 3-oxoacid CoA-transferase family.	0.860
EFD94331.1	EFD94447.1	HMPREF0889_0922	HMPREF0889_0506	Putative CoA-substrate-specific enzyme activase; Identified by match to protein family HMM PF01869; match to protein family HMM TIGR00241.	2-hydroxyglutaryl-CoA dehydratase, D-component; Identified by match to protein family HMM PF06050.	0.834
EFD94331.1	EFD94448.1	HMPREF0889_0922	HMPREF0889_0507	Putative CoA-substrate-specific enzyme activase; Identified by match to protein family HMM PF01869; match to protein family HMM TIGR00241.	2-hydroxyglutaryl-CoA dehydratase, D-component; Identified by match to protein family HMM PF06050.	0.834
EFD94331.1	hgdC	HMPREF0889_0922	HMPREF0889_0508	Putative CoA-substrate-specific enzyme activase; Identified by match to protein family HMM PF01869; match to protein family HMM TIGR00241.	Putative benzoyl-CoA reductase, subunit D; Identified by match to protein family HMM PF01869; match to protein family HMM TIGR00241.	0.412
EFD94446.1	EFD93774.1	HMPREF0889_0505	HMPREF0889_1128	butyryl-CoA dehydrogenase; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028.	butyryl-CoA dehydrogenase; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028.	0.758
EFD94446.1	EFD94447.1	HMPREF0889_0505	HMPREF0889_0506	butyryl-CoA dehydrogenase; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028.	2-hydroxyglutaryl-CoA dehydratase, D-component; Identified by match to protein family HMM PF06050.	0.889
EFD94446.1	EFD94448.1	HMPREF0889_0505	HMPREF0889_0507	butyryl-CoA dehydrogenase; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028.	2-hydroxyglutaryl-CoA dehydratase, D-component; Identified by match to protein family HMM PF06050.	0.891
EFD94446.1	EFD94450.1	HMPREF0889_0505	HMPREF0889_0509	butyryl-CoA dehydrogenase; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028.	Glyoxalase family protein.	0.445
EFD94446.1	EFD94451.1	HMPREF0889_0505	HMPREF0889_0510	butyryl-CoA dehydrogenase; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028.	CoA transferase; Identified by match to protein family HMM PF01144; Belongs to the 3-oxoacid CoA-transferase family.	0.870
EFD94446.1	EFD94628.1	HMPREF0889_0505	HMPREF0889_0044	butyryl-CoA dehydrogenase; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028.	CoA transferase; Identified by match to protein family HMM PF01144; Belongs to the 3-oxoacid CoA-transferase family.	0.811
EFD94446.1	hgdC	HMPREF0889_0505	HMPREF0889_0508	butyryl-CoA dehydrogenase; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028.	Putative benzoyl-CoA reductase, subunit D; Identified by match to protein family HMM PF01869; match to protein family HMM TIGR00241.	0.455
EFD94447.1	EFD93774.1	HMPREF0889_0506	HMPREF0889_1128	2-hydroxyglutaryl-CoA dehydratase, D-component; Identified by match to protein family HMM PF06050.	butyryl-CoA dehydrogenase; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028.	0.848
EFD94447.1	EFD94331.1	HMPREF0889_0506	HMPREF0889_0922	2-hydroxyglutaryl-CoA dehydratase, D-component; Identified by match to protein family HMM PF06050.	Putative CoA-substrate-specific enzyme activase; Identified by match to protein family HMM PF01869; match to protein family HMM TIGR00241.	0.834
EFD94447.1	EFD94446.1	HMPREF0889_0506	HMPREF0889_0505	2-hydroxyglutaryl-CoA dehydratase, D-component; Identified by match to protein family HMM PF06050.	butyryl-CoA dehydrogenase; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028.	0.889
EFD94447.1	EFD94448.1	HMPREF0889_0506	HMPREF0889_0507	2-hydroxyglutaryl-CoA dehydratase, D-component; Identified by match to protein family HMM PF06050.	2-hydroxyglutaryl-CoA dehydratase, D-component; Identified by match to protein family HMM PF06050.	0.998
EFD94447.1	EFD94450.1	HMPREF0889_0506	HMPREF0889_0509	2-hydroxyglutaryl-CoA dehydratase, D-component; Identified by match to protein family HMM PF06050.	Glyoxalase family protein.	0.872

page 1 of 3

Server load: low (12%) [HD]

Permalink

Network

Neighborhood

Experiments

Fusion

Databases

Co-occurrence

Textmining

Co-expression

© STRING Consortium 2026

Credits

Access

Info

About