Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFD93674.1Glycosyltransferase, group 2 family protein; Identified by match to protein family HMM PF00535. (347 aa)    
Predicted Functional Partners:
EFD93528.1
NAD dependent epimerase/dehydratase family protein; Identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993.
 
 
 0.711
EFD93673.1
Heptosyltransferase; Identified by match to protein family HMM PF01075.
  
  
 0.698
EFD93676.1
Arylsulfatase; Identified by match to protein family HMM PF00884.
     
 0.691
EFD93675.1
Hypothetical protein.
       0.678
EFD93322.1
Glycosyltransferase, group 4 family; Identified by match to protein family HMM PF00953.
  
 
 0.521
EFD94547.1
Dolichyl-phosphate-mannose-protein mannosyltransferase; Identified by match to protein family HMM PF02366.
  
 
 0.505
fmt
methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
  
 
 0.489
EFD93413.1
Identified by match to protein family HMM PF00485.
   
 
  0.488
thrS
threonine--tRNA ligase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr).
   
 
  0.485
EFD94188.1
Glycosyltransferase, group 2 family protein; Identified by match to protein family HMM PF00535.
 
  
 0.477
Your Current Organism:
Megasphaera genomosp.
NCBI taxonomy Id: 699218
Other names: M. genomosp. type_1 str. 28L, Megasphaera genomosp. type_1 str. 28L
Server load: low (18%) [HD]