EFD93677.1 protein (Megasphaera genomosp.) - STRING interaction network

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EFD93677.1

3D domain protein; Identified by match to protein family HMM PF06725; match to protein family HMM PF07501. (323 aa)

Predicted Functional Partners:

lysM

0.785

ksgA

0.667

ispE

0.584

rnmV

0.566

EFD94699.1

0.489

EFD93924.1

0.454

EFD94084.1

0.434

EFD94693.1

0.416

Your Current Organism:

Megasphaera genomosp.

NCBI taxonomy Id: 699218
Other names: M. genomosp. type_1 str. 28L, Megasphaera genomosp. type_1 str. 28L

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EFD93677.1	EFD93924.1	HMPREF0889_1027	HMPREF0889_0321	3D domain protein; Identified by match to protein family HMM PF06725; match to protein family HMM PF07501.	Identified by match to protein family HMM PF00395.	0.454
EFD93677.1	EFD94084.1	HMPREF0889_1027	HMPREF0889_1632	3D domain protein; Identified by match to protein family HMM PF06725; match to protein family HMM PF07501.	Kinase domain protein; Identified by match to protein family HMM PF00069; match to protein family HMM PF03793; match to protein family HMM PF07714.	0.434
EFD93677.1	EFD94693.1	HMPREF0889_1027	HMPREF0889_1432	3D domain protein; Identified by match to protein family HMM PF06725; match to protein family HMM PF07501.	Identified by match to protein family HMM PF00877; match to protein family HMM PF01471.	0.416
EFD93677.1	EFD94699.1	HMPREF0889_1027	HMPREF0889_1438	3D domain protein; Identified by match to protein family HMM PF06725; match to protein family HMM PF07501.	Hydrolase, TatD family; Identified by match to protein family HMM PF01026; match to protein family HMM TIGR00010.	0.489
EFD93677.1	ispE	HMPREF0889_1027	HMPREF0889_0451	3D domain protein; Identified by match to protein family HMM PF06725; match to protein family HMM PF07501.	4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol.	0.584
EFD93677.1	ksgA	HMPREF0889_1027	HMPREF0889_0226	3D domain protein; Identified by match to protein family HMM PF06725; match to protein family HMM PF07501.	Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.	0.667
EFD93677.1	lysM	HMPREF0889_1027	HMPREF0889_1670	3D domain protein; Identified by match to protein family HMM PF06725; match to protein family HMM PF07501.	LysM domain protein; Identified by match to protein family HMM PF01476.	0.785
EFD93677.1	rnmV	HMPREF0889_1027	HMPREF0889_0227	3D domain protein; Identified by match to protein family HMM PF06725; match to protein family HMM PF07501.	Ribonuclease M5; Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step.	0.566
EFD93924.1	EFD93677.1	HMPREF0889_0321	HMPREF0889_1027	Identified by match to protein family HMM PF00395.	3D domain protein; Identified by match to protein family HMM PF06725; match to protein family HMM PF07501.	0.454
EFD93924.1	EFD94084.1	HMPREF0889_0321	HMPREF0889_1632	Identified by match to protein family HMM PF00395.	Kinase domain protein; Identified by match to protein family HMM PF00069; match to protein family HMM PF03793; match to protein family HMM PF07714.	0.564
EFD93924.1	lysM	HMPREF0889_0321	HMPREF0889_1670	Identified by match to protein family HMM PF00395.	LysM domain protein; Identified by match to protein family HMM PF01476.	0.559
EFD94084.1	EFD93677.1	HMPREF0889_1632	HMPREF0889_1027	Kinase domain protein; Identified by match to protein family HMM PF00069; match to protein family HMM PF03793; match to protein family HMM PF07714.	3D domain protein; Identified by match to protein family HMM PF06725; match to protein family HMM PF07501.	0.434
EFD94084.1	EFD93924.1	HMPREF0889_1632	HMPREF0889_0321	Kinase domain protein; Identified by match to protein family HMM PF00069; match to protein family HMM PF03793; match to protein family HMM PF07714.	Identified by match to protein family HMM PF00395.	0.564
EFD94084.1	EFD94693.1	HMPREF0889_1632	HMPREF0889_1432	Kinase domain protein; Identified by match to protein family HMM PF00069; match to protein family HMM PF03793; match to protein family HMM PF07714.	Identified by match to protein family HMM PF00877; match to protein family HMM PF01471.	0.441
EFD94693.1	EFD93677.1	HMPREF0889_1432	HMPREF0889_1027	Identified by match to protein family HMM PF00877; match to protein family HMM PF01471.	3D domain protein; Identified by match to protein family HMM PF06725; match to protein family HMM PF07501.	0.416
EFD94693.1	EFD94084.1	HMPREF0889_1432	HMPREF0889_1632	Identified by match to protein family HMM PF00877; match to protein family HMM PF01471.	Kinase domain protein; Identified by match to protein family HMM PF00069; match to protein family HMM PF03793; match to protein family HMM PF07714.	0.441
EFD94693.1	lysM	HMPREF0889_1432	HMPREF0889_1670	Identified by match to protein family HMM PF00877; match to protein family HMM PF01471.	LysM domain protein; Identified by match to protein family HMM PF01476.	0.406
EFD94699.1	EFD93677.1	HMPREF0889_1438	HMPREF0889_1027	Hydrolase, TatD family; Identified by match to protein family HMM PF01026; match to protein family HMM TIGR00010.	3D domain protein; Identified by match to protein family HMM PF06725; match to protein family HMM PF07501.	0.489
EFD94699.1	ksgA	HMPREF0889_1438	HMPREF0889_0226	Hydrolase, TatD family; Identified by match to protein family HMM PF01026; match to protein family HMM TIGR00010.	Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.	0.465
ispE	EFD93677.1	HMPREF0889_0451	HMPREF0889_1027	4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol.	3D domain protein; Identified by match to protein family HMM PF06725; match to protein family HMM PF07501.	0.584

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