STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADC90329.1Transglycosylase; Identified by match to protein family HMM PF00905; match to protein family HMM PF00912. (799 aa)    
Predicted Functional Partners:
ADC91054.1
Serine-type D-Ala-D-Ala carboxypeptidase; Identified by match to protein family HMM PF00768; Belongs to the peptidase S11 family.
  
 
 0.925
ADC91258.1
Serine-type D-Ala-D-Ala carboxypeptidase; Identified by match to protein family HMM PF02557.
     
 0.906
ADC90690.1
Penicillin-binding protein, transpeptidase domain protein; Identified by match to protein family HMM PF00905; match to protein family HMM PF03717; match to protein family HMM PF03793.
 
 
 
 0.859
ADC91387.1
Penicillin-binding protein, transpeptidase domain protein; Identified by match to protein family HMM PF00905.
 
 
 
 0.788
ADC90617.1
Peptidase, M23 family; Identified by match to protein family HMM PF01551.
 
   
 0.737
ADC90478.1
Hypothetical protein.
   
 
 0.707
ADC90749.1
Cell cycle protein, FtsW/RodA/SpoVE family; Identified by match to protein family HMM PF01098; Belongs to the SEDS family.
 
 
 
 0.707
ADC91787.1
Cell cycle protein, FtsW/RodA/SpoVE family; Identified by match to protein family HMM PF01098; Belongs to the SEDS family.
 
 
 
 0.703
ADC90687.1
Peptidase, M23 family; Identified by match to protein family HMM PF01551.
  
   
 0.680
murA
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
  
   
 0.668
Your Current Organism:
Mageeibacillus indolicus
NCBI taxonomy Id: 699246
Other names: Clostridiales genomosp. BVAB3 str. UPII9-5, M. indolicus UPII9-5, Mageeibacillus indolicus UPII9-5
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