Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ADC90759.1 | ADC91346.1 | HMPREF0868_1440 | HMPREF0868_0127 | Putative Porphobilinogen deaminase, dipyromethane cofactor binding domain protein; Identified by match to protein family HMM PF00590. | Hypothetical protein. | 0.486 |
ADC90759.1 | tpiA | HMPREF0868_1440 | HMPREF0868_0610 | Putative Porphobilinogen deaminase, dipyromethane cofactor binding domain protein; Identified by match to protein family HMM PF00590. | Triose-phosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. | 0.627 |
ADC91346.1 | ADC90759.1 | HMPREF0868_0127 | HMPREF0868_1440 | Hypothetical protein. | Putative Porphobilinogen deaminase, dipyromethane cofactor binding domain protein; Identified by match to protein family HMM PF00590. | 0.486 |
ADC91346.1 | ADC91507.1 | HMPREF0868_0127 | HMPREF0868_0128 | Hypothetical protein. | Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583. | 0.529 |
ADC91346.1 | tpiA | HMPREF0868_0127 | HMPREF0868_0610 | Hypothetical protein. | Triose-phosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. | 0.468 |
ADC91507.1 | ADC91346.1 | HMPREF0868_0128 | HMPREF0868_0127 | Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583. | Hypothetical protein. | 0.529 |
tpiA | ADC90759.1 | HMPREF0868_0610 | HMPREF0868_1440 | Triose-phosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. | Putative Porphobilinogen deaminase, dipyromethane cofactor binding domain protein; Identified by match to protein family HMM PF00590. | 0.627 |
tpiA | ADC91346.1 | HMPREF0868_0610 | HMPREF0868_0127 | Triose-phosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. | Hypothetical protein. | 0.468 |