STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADC90537.1DNA-binding helix-turn-helix protein; Identified by match to protein family HMM PF01381. (210 aa)    
Predicted Functional Partners:
ADC91393.1
DNA-binding helix-turn-helix protein; Identified by match to protein family HMM PF01381.
 
     0.657
ADC91512.1
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664.
  
     0.618
ADC90674.1
Hypothetical protein.
 
     0.520
ADC90720.1
Repeat protein; Identified by match to protein family HMM PF09479.
  
     0.442
ADC90767.1
DNA-binding helix-turn-helix protein; Identified by match to protein family HMM PF01381.
       0.405
ADC91434.1
Hypothetical protein.
       0.402
Your Current Organism:
Mageeibacillus indolicus
NCBI taxonomy Id: 699246
Other names: Clostridiales genomosp. BVAB3 str. UPII9-5, M. indolicus UPII9-5, Mageeibacillus indolicus UPII9-5
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