STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADC91607.1Hypothetical protein. (200 aa)    
Predicted Functional Partners:
ADC91106.1
Periplasmic binding protein; Identified by match to protein family HMM PF01497.
 
  
 0.872
nifJ
Pyruvate synthase; Identified by match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855; match to protein family HMM TIGR02176.
     
 0.803
ADC90381.1
Hypothetical protein.
       0.773
ADC91769.1
Oxidoreductase, nitrogenase component 1; Identified by match to protein family HMM PF00148; overlaps another CDS with the same product name.
 
   
 0.726
ADC90781.1
Oxidoreductase, nitrogenase component 1; Identified by match to protein family HMM PF00148; overlaps another CDS with the same product name.
 
   
 0.714
ADC90912.1
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
 
  
 0.667
ADC90423.1
Iron chelate uptake ABC transporter, FeCT family, permease protein; Identified by match to protein family HMM PF01032; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
  
 0.667
ADC90429.1
Putative nitrogenase iron protein; Identified by match to protein family HMM PF00142; Belongs to the NifH/BchL/ChlL family.
     
 0.509
ADC91443.1
Hypothetical protein.
  
     0.451
Your Current Organism:
Mageeibacillus indolicus
NCBI taxonomy Id: 699246
Other names: Clostridiales genomosp. BVAB3 str. UPII9-5, M. indolicus UPII9-5, Mageeibacillus indolicus UPII9-5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.