STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADC90808.1ABC transporter, solute-binding protein; Identified by match to protein family HMM PF01547. (456 aa)    
Predicted Functional Partners:
ADC91540.1
ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
 
 
 0.901
ADC91822.1
ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
 
 
 0.885
ADC91521.1
ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
 
 
 0.885
ADC90899.1
ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
 
 
 0.879
ADC91469.1
ABC transporter, solute-binding protein; Identified by match to protein family HMM PF01547.
 
     0.825
ADC90914.1
Hypothetical protein.
 
     0.814
ADC91793.1
Hypothetical protein.
 
    0.801
ADC91543.1
Carbohydrate binding domain protein; Identified by match to protein family HMM PF02018.
       0.714
ADC91051.1
Phycoerythrin, alpha/beta chain; Identified by match to protein family HMM PF00005; match to protein family HMM PF03459; match to protein family HMM PF08402; Belongs to the ABC transporter superfamily.
  
 
 0.697
ADC91652.1
ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
 
 
 0.672
Your Current Organism:
Mageeibacillus indolicus
NCBI taxonomy Id: 699246
Other names: Clostridiales genomosp. BVAB3 str. UPII9-5, M. indolicus UPII9-5, Mageeibacillus indolicus UPII9-5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.