STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADC91331.1ABC transporter, substrate-binding protein, family 5; Identified by match to protein family HMM PF00496. (508 aa)    
Predicted Functional Partners:
ADC91123.1
ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
 
 0.987
ADC90746.1
ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
   0.923
ADC91655.1
ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
  0.907
ADC91073.1
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664.
 
     0.833
ADC91823.1
ABC transporter, substrate-binding protein, family 5; Identified by match to protein family HMM PF00496.
  
  
  0.817
ADC91718.1
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664.
 
     0.789
ADC90487.1
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
 
    0.768
nifJ
Pyruvate synthase; Identified by match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855; match to protein family HMM TIGR02176.
  
    0.651
ADC90987.1
ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
 
 
 0.573
ADC90668.1
ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
 
 
 0.550
Your Current Organism:
Mageeibacillus indolicus
NCBI taxonomy Id: 699246
Other names: Clostridiales genomosp. BVAB3 str. UPII9-5, M. indolicus UPII9-5, Mageeibacillus indolicus UPII9-5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.