Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ADC90779.1 | ADC91726.1 | HMPREF0868_0784 | HMPREF0868_0783 | Identified by match to protein family HMM PF02588. | Flavodoxin; Identified by match to protein family HMM PF00258; match to protein family HMM TIGR01753. | 0.430 |
| ADC90779.1 | glgB | HMPREF0868_0784 | HMPREF0868_0785 | Identified by match to protein family HMM PF02588. | 1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. | 0.510 |
| ADC90779.1 | glgC | HMPREF0868_0784 | HMPREF0868_0786 | Identified by match to protein family HMM PF02588. | Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family. | 0.420 |
| ADC90779.1 | glgD | HMPREF0868_0784 | HMPREF0868_0787 | Identified by match to protein family HMM PF02588. | Glucose-1-phosphate adenylyltransferase, GlgD subunit; Identified by match to protein family HMM TIGR02092. | 0.405 |
| ADC91726.1 | ADC90779.1 | HMPREF0868_0783 | HMPREF0868_0784 | Flavodoxin; Identified by match to protein family HMM PF00258; match to protein family HMM TIGR01753. | Identified by match to protein family HMM PF02588. | 0.430 |
| glgB | ADC90779.1 | HMPREF0868_0785 | HMPREF0868_0784 | 1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. | Identified by match to protein family HMM PF02588. | 0.510 |
| glgB | glgC | HMPREF0868_0785 | HMPREF0868_0786 | 1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. | Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family. | 0.988 |
| glgB | glgD | HMPREF0868_0785 | HMPREF0868_0787 | 1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. | Glucose-1-phosphate adenylyltransferase, GlgD subunit; Identified by match to protein family HMM TIGR02092. | 0.933 |
| glgC | ADC90779.1 | HMPREF0868_0786 | HMPREF0868_0784 | Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family. | Identified by match to protein family HMM PF02588. | 0.420 |
| glgC | glgB | HMPREF0868_0786 | HMPREF0868_0785 | Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family. | 1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. | 0.988 |
| glgC | glgD | HMPREF0868_0786 | HMPREF0868_0787 | Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family. | Glucose-1-phosphate adenylyltransferase, GlgD subunit; Identified by match to protein family HMM TIGR02092. | 0.994 |
| glgD | ADC90779.1 | HMPREF0868_0787 | HMPREF0868_0784 | Glucose-1-phosphate adenylyltransferase, GlgD subunit; Identified by match to protein family HMM TIGR02092. | Identified by match to protein family HMM PF02588. | 0.405 |
| glgD | glgB | HMPREF0868_0787 | HMPREF0868_0785 | Glucose-1-phosphate adenylyltransferase, GlgD subunit; Identified by match to protein family HMM TIGR02092. | 1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. | 0.933 |
| glgD | glgC | HMPREF0868_0787 | HMPREF0868_0786 | Glucose-1-phosphate adenylyltransferase, GlgD subunit; Identified by match to protein family HMM TIGR02092. | Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family. | 0.994 |