STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADC90911.1Polysaccharide deacetylase; Identified by match to protein family HMM PF01522. (373 aa)    
Predicted Functional Partners:
ADC91804.1
Glycosyltransferase, group 2 family protein; Identified by match to protein family HMM PF00535.
 
  
 0.719
ADC91591.1
Identified by match to protein family HMM PF08903.
       0.572
ADC90389.1
Hypothetical protein.
       0.442
ADC91443.1
Hypothetical protein.
  
     0.436
ADC91356.1
Identified by match to protein family HMM PF00082; match to protein family HMM PF02225; match to protein family HMM PF06280; Belongs to the peptidase S8 family.
 
     0.401
Your Current Organism:
Mageeibacillus indolicus
NCBI taxonomy Id: 699246
Other names: Clostridiales genomosp. BVAB3 str. UPII9-5, M. indolicus UPII9-5, Mageeibacillus indolicus UPII9-5
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