STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADC91788.1PA domain protein; Identified by match to protein family HMM PF00082; match to protein family HMM PF02225; match to protein family HMM PF06280; Belongs to the peptidase S8 family. (1871 aa)    
Predicted Functional Partners:
ADC91498.1
ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
  
 
 0.529
ADC91524.1
SNF2 family N-terminal domain protein; Identified by match to protein family HMM PF00176; match to protein family HMM PF00271.
  
 
 
 0.504
ADC91335.1
Repeat protein; Identified by match to protein family HMM PF09479.
  
 
 0.464
ADC90625.1
Repeat protein; Identified by match to protein family HMM PF09479.
  
 
 0.464
ADN43926.1
LPXTG-motif cell wall anchor domain protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF05738; match to protein family HMM TIGR01376.
  
 
 0.464
ADC91321.1
Hypothetical protein.
  
 
 0.464
ADC91296.1
Putative flavodoxin; Identified by match to protein family HMM PF00258.
       0.446
secY
Preprotein translocase, SecY subunit; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.
    
   0.442
Your Current Organism:
Mageeibacillus indolicus
NCBI taxonomy Id: 699246
Other names: Clostridiales genomosp. BVAB3 str. UPII9-5, M. indolicus UPII9-5, Mageeibacillus indolicus UPII9-5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.