STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADC90768.1Chloride transporter, ClC family; Identified by match to protein family HMM PF00654; match to protein family HMM PF02080. (520 aa)    
Predicted Functional Partners:
nifJ
Pyruvate synthase; Identified by match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855; match to protein family HMM TIGR02176.
  
 
 0.885
ADC91104.1
Hypothetical protein.
       0.773
ADC91290.1
Potassium uptake protein, TrkH family; Identified by match to protein family HMM PF02386; match to protein family HMM TIGR00933.
  
 
 0.686
ADC90518.1
Potassium uptake protein, TrkH family; Identified by match to protein family HMM PF02386.
  
 
 0.686
ADC91358.1
Transcriptional regulator, ArsR family; Identified by match to protein family HMM PF01022.
     
 0.597
ADC90759.1
Putative Porphobilinogen deaminase, dipyromethane cofactor binding domain protein; Identified by match to protein family HMM PF00590.
 
    0.596
ADC91618.1
Arsenical resistance operon trans-acting repressor ArsD; Identified by match to protein family HMM PF06953.
       0.563
ADC91405.1
Putative ribosomal RNA small subunit methyltransferase B; Identified by match to protein family HMM PF01029; match to protein family HMM PF01189; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
  
   0.541
uvrC
Excinuclease ABC, C subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.
     
 0.531
ADC90822.1
Amino acid permease; Identified by match to protein family HMM PF00324.
 
 
 
 0.506
Your Current Organism:
Mageeibacillus indolicus
NCBI taxonomy Id: 699246
Other names: Clostridiales genomosp. BVAB3 str. UPII9-5, M. indolicus UPII9-5, Mageeibacillus indolicus UPII9-5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.