STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADN43925.1Branched-chain amino acid ABC transporter, permease protein; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family. (339 aa)    
Predicted Functional Partners:
ADC90865.1
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
 
 0.999
ADC91567.1
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
 
 0.999
ADC91364.1
Branched-chain amino acid ABC transporter, permease protein; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family.
 
0.999
ADC90519.1
Identified by match to protein family HMM PF01094.
 
 
 0.998
ADC90864.1
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
    
 0.909
ADC91647.1
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
 
    
 0.908
ADC91377.1
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
 
      0.890
ADC91514.1
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; Belongs to the ABC transporter superfamily.
 
 
    0.789
dhaL
Dihydroxyacetone kinase, L subunit; Identified by match to protein family HMM PF02734; match to protein family HMM TIGR02365.
       0.776
dhaK
Dihydroxyacetone kinase, DhaK subunit; Identified by match to protein family HMM PF02733; match to protein family HMM TIGR02363.
       0.776
Your Current Organism:
Mageeibacillus indolicus
NCBI taxonomy Id: 699246
Other names: Clostridiales genomosp. BVAB3 str. UPII9-5, M. indolicus UPII9-5, Mageeibacillus indolicus UPII9-5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.