STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADC91314.1Identified by match to protein family HMM PF06125. (128 aa)    
Predicted Functional Partners:
ADC91050.1
Identified by match to protein family HMM PF06125.
 
    0.948
ADC90477.1
Identified by match to protein family HMM PF01580.
 
  
 0.939
ADC91495.1
DNA-binding helix-turn-helix protein; Identified by match to protein family HMM PF01381; match to protein family HMM PF02486.
 
   
 0.874
ADC91369.1
Antirestriction protein ArdA; Identified by match to protein family HMM PF07275.
 
   
 0.835
ADC91391.1
Hypothetical protein.
 
   
 0.832
ADC91579.1
Identified by match to protein family HMM PF00877.
 
  
 0.829
ADC90887.1
Hypothetical protein.
 
     0.827
ADC91103.1
Hypothetical protein.
 
     0.801
ADN43922.1
Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.
 
     0.799
ADN43923.1
Hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.
 
     0.762
Your Current Organism:
Mageeibacillus indolicus
NCBI taxonomy Id: 699246
Other names: Clostridiales genomosp. BVAB3 str. UPII9-5, M. indolicus UPII9-5, Mageeibacillus indolicus UPII9-5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.