STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADC91333.1Type III restriction enzyme, res subunit; Identified by match to protein family HMM PF04851. (878 aa)    
Predicted Functional Partners:
ADC91484.1
DNA (cytosine-5-)-methyltransferase; Identified by match to protein family HMM PF01555.
 
     0.948
ADC90674.1
Hypothetical protein.
 
     0.922
ADC91044.1
Hypothetical protein.
 
     0.860
ADC90732.1
Identified by match to protein family HMM PF07751.
 
     0.533
ADC91184.1
Hypothetical protein.
 
     0.429
Your Current Organism:
Mageeibacillus indolicus
NCBI taxonomy Id: 699246
Other names: Clostridiales genomosp. BVAB3 str. UPII9-5, M. indolicus UPII9-5, Mageeibacillus indolicus UPII9-5
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