STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADC90820.1Identified by match to protein family HMM PF04143. (441 aa)    
Predicted Functional Partners:
ADC91075.1
Putative taurine ABC transporter, periplasmic binding protein; Identified by match to protein family HMM PF04069.
 
     0.797
ADC91820.1
Pyridine nucleotide-disulfide oxidoreductase; Identified by match to protein family HMM PF00070; match to protein family HMM PF00581; match to protein family HMM PF02852; match to protein family HMM PF07992.
 
    0.771
ADC91303.1
ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
 
     0.718
ADC91620.1
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
 
     0.616
ADC91081.1
Identified by match to protein family HMM PF04143.
 
    
0.499
ADC90764.1
LysR substrate binding domain protein; Identified by match to protein family HMM PF00126; match to protein family HMM PF03466; Belongs to the LysR transcriptional regulatory family.
 
     0.467
ADC91699.1
Hypothetical protein.
       0.452
Your Current Organism:
Mageeibacillus indolicus
NCBI taxonomy Id: 699246
Other names: Clostridiales genomosp. BVAB3 str. UPII9-5, M. indolicus UPII9-5, Mageeibacillus indolicus UPII9-5
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