STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SRA_00148Transcriptional antiterminator and PTS system component IIA; COG3711 Transcriptional antiterminator. (694 aa)    
Predicted Functional Partners:
SRA_00153
COG3414 Phosphotransferase system, galactitol-specific IIB component.
 
  
 0.959
SRA_00158
PTS system, ascorbate-specific IIC component; COG3037 Uncharacterized protein conserved in bacteria.
 
  
 0.952
SRA_00163
Hypothetical protein; COG0457 FOG: TPR repeat.
 
     0.933
SRA_00173
Kinase.
 
     0.916
SRA_08591
Ascorbate-specific PTS system enzyme IIC; COG3037 Uncharacterized protein conserved in bacteria.
 
  
 0.775
SRA_00168
COG0191 Fructose/tagatose bisphosphate aldolase.
 
  
 0.736
SRA_07871
PTS system, beta-glucoside-specific IIABC component; COG1264 Phosphotransferase system IIB components.
 
 
 0.714
SRA_00972
Putative PTS system, sucrose-specific IIABC component; COG1264 Phosphotransferase system IIB components.
  
 
 0.675
SRA_04906
Putative PTS system, beta-glucoside-specific EII component; COG1264 Phosphotransferase system IIB components.
  
 
 0.675
TreB
Putative PTS system, trehalose-specific IIABC component; COG1264 Phosphotransferase system IIB components.
  
 
 0.675
Your Current Organism:
Streptococcus ratti
NCBI taxonomy Id: 699248
Other names: S. ratti FA-1 = DSM 20564, Streptococcus ratti DSM 20564, Streptococcus ratti DSM 20564 = FA-1, Streptococcus ratti FA-1, Streptococcus ratti FA-1 = DSM 20564
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.