STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SRA_00308COG4483 Uncharacterized protein conserved in bacteria. (68 aa)    
Predicted Functional Partners:
SRA_00313
Glucokinase; COG1940 Transcriptional regulator/sugar kinase.
  
    0.816
SRA_00318
Hypothetical protein; COG0607 Rhodanese-related sulfurtransferase.
       0.790
SRA_07911
Hypothetical protein; COG5503 Uncharacterized conserved small protein; Belongs to the UPF0356 family.
  
  
 0.763
SRA_00303
Peroxide resistance protein Dpr; COG0783 DNA-binding ferritin-like protein (oxidative damage protectant); Belongs to the Dps family.
  
    0.546
prsA
Foldase protein PrsA; Plays a major role in protein secretion by helping the post- translocational extracellular folding of several secreted proteins.
  
     0.546
TypA
Putative GTP-binding protein; COG1217 Predicted membrane GTPase involved in stress response.
       0.536
SRA_06386
TPR repeat-containing protein; COG0457 FOG: TPR repeat.
  
     0.522
SRA_03771
Integral membrane protein; COG1368 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily.
 
     0.497
SRA_00328
Hypothetical protein.
       0.489
rpsK
30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.
  
    0.461
Your Current Organism:
Streptococcus ratti
NCBI taxonomy Id: 699248
Other names: S. ratti FA-1 = DSM 20564, Streptococcus ratti DSM 20564, Streptococcus ratti DSM 20564 = FA-1, Streptococcus ratti FA-1, Streptococcus ratti FA-1 = DSM 20564
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.